Welcome to JAAN's science class!!

Big hi to all of you! I'm an undergraduate following a Bsc in bioscience. Trust me I know the feeling of surfing around the net for ages and getting nothing in return! Or getting something worthless for the time we spent surfing. So I started this blog adding the science stuff I have noted which I think might help someone in their home work. Ok then enjoy!

28 March 2012

Applications of conductivity measurements: Calculating the solubility product of a partially soluble salt (Lab report)



Theory
The solubility of poorly soluble salts is expressed as the solubility product. That is the product of the concentration of ions in the solution which are in equilibrium with the solid ion. These concentrations can be determined via conductivity measurements. In this practical PbSO4 is used.
                                 PbSO4 Pb2+ + SO42-
Assume concentration of solid is a constant.
Concentration of Pb2+= concentration of SO42- = C
                             \  Ksp = [Pb2+aq] [SO42-aq]
                                    Ksp = C2

The measurement of the specific conductivity, K of the saturated solution leads to a value of the concentration.
                      i.e.       C = K/ Λ0
                      As,   Ksp = C2
                               Ksp = (K/ Λ0)2

 Λ0 for PbSO4 = 3.02 × 10-2 m2Smol-
Λ0 = Molar conductivity at infinite dilution

Procedure
About 2g of finely powdered PbSO4 was measured using the electric balance into a clean, dry watch glass.
It was added to a clean beaker. The watch glass was washed with distilled water and that washed water was also added to the beaker.
To remove impurities it was shaken by adding distilled water. It was kept aside for a while, for the salt to be collected at the bottom of the beaker. Then the upper layer was decanted and repeated this step for several times.
An empty reagent bottle was kept in a water bath at 240C in order to maintain the temperature of the reagent bottle at 250C.
Then the well- washed salt was added to the reagent bottle and added 100mL of distilled water.
After awhile without disturbing the solid, the clear upper solution was decanted into a clean beaker and the conductivity was measured.

Results
K of distilled water at 250C = 4.2 µS/cm
K of PbSO4 at 250C = 39.2 µS/cm

Calculations
Corrected conductivity of PbSO4 = (39.2 – 4.2) µS/cm
                                                           = 35.0 µS/cm
                                                                  = 35.0 × 10-2 Sm-
C = K/ Λ0
C = 35.0 × 10-2 Sm- / 3.02 × 10-2 m2Smol-
C = 0.11589 molm-3
C = 0.11589 × 10-3 moldm-3
PbSO4 Pb2+ + SO42-
Ksp = [Pb2+aq] [SO42-aq]
Ksp = C2
Ksp = (0.11589 × 10-3 moldm-3)2
         = 1.3430 × 10-8 mol2 dm-6

Conclusion
Exact given Ksp at 250C is 1.6 × 10-8 mol2 dm-6. Practically obtained Ksp at 250C is 1.3430× 10-8 mol2 dm-6
As the both values are closer we can use conductivity measurements in order to calculated KSP.

Discussion
The precipitate was washed in order to remove impurities that may affect the results. It should be washed several times to obtain a well- washed precipitate. During this process, precipitate can be also removed. Therefore all 2g of the sample wouldn’t be left.

When maintaining the temperature  of 250C, the water bath was kept at a temperature about 240C. this is because we measure the temperature of the water bath assuming the temperature inside the reagent bottle is at 250C. But actually the temperature of the solution inside would be slightly higher than the temperature of the water bath as the glass of the reagent bottle separates both. Therefore the temperature of the water bath was kept at lower temperature to obtain the required temperature for the solution.

Reagent bottle should be shaken time to time when it was kept in the water bath. This is to increase the dissociation and reach the equilibrium. If not, we might have not measured the conductivity at the equilibrium and that will alter the true Ksp value.

The calculated Ksp value is slightly smaller than the exact given Ksp value due to errors occurred during the experiment. Mainly the personal errors. Such as temperature maintaining errors, measuring errors and personal carelessness.

When preparing the solutions, the distilled water was added. Distilled water also contains ions it self. Therefore additional conductivity from the distilled water would be raised in the solution. For this reason the conductivity of the solution is corrected by deducting the conductivity of water. 



21 March 2012

Physiology of Synapse:- Excitatory synapses and Inhibitory synapses


Synapse is simply a junction between two neurons. There are two types of synapses in central nervous system.
·         Excitatory synapses
·         Inhibitory synapses


Excitatory synapses
Pre synaptic knob secretes as excitatory substance. (Ex: Acetyl choline, Noradrinalin, Gutamic acid)

Transmission:

Nerve impulse à pre synaptic knob releases acetyl choline (Ach)àAch diffuse across synaptic cleftàAch combine with receptor sites of post synaptic membraneàpermeability of post synaptic membrane changesà permeability to Na+ increases and Na+ enter the post synaptic knobà Excitatory post synaptic potential (EPSP) is obtainedàthreshold potential is reachedà action potential is formedà distribution of action potential

A combined EPSP depolarize the membrane to a threshold value to generate an action potential is known as summation. Summation can occur in two ways as temporal summation which is obtained by repeat discharge of single pre synaptic knob and spatial summation which is obtained by numerous pre synaptic knobs.

Inhibitory synapses
Pre synaptic knob secretes an inhibitory substance. (Ex: alpha butric acid and glycine)
This inhibitory synapses function in two ways as post synaptic inhibition and pre synaptic inhibition.

Post synaptic inhibition
Nerve impulseà pre synaptic knob release an inhibitory substance (GABA)àGABA diffuse across synaptic cleftà GABA binds with receptor sites on post synaptic membraneà permeability of post synaptic membrane changesà permeability to K+ and Cl- ions increaseà K+ leaves and Cl- ions enteràInhibitory post synaptic potential (IPSP) is obtainedà membrane hyperpolarizedà no action potential initiated

Pre synaptic inhibition
Nerve impulseà pre synaptic knob release inhibitory substancesàhyperpolarize the pre synaptic  excitatory membraneà prevent excitatory substances releasingà no excitation occurs on post synaptic membrane     

Sequence of events take place during action potential in brief


>In resting state, membrane is permeable to K+ and relatively impermeable to Na+.

>When a stimulus depolarize the membrane into the threshold value the voltage gated Na+ channels open, vastly increasing the membrane’s permeability to Na+.

>Na+ enters the cell across the membrane under the influence of both concentration gradient and the electric gradient.

>Na+ makes the membrane more depolarized and that makes more voltage gated sodium channels to open.

>As the membrane potential approaches equilibrium potential of Na+ the driving force of Na+ is reduced. Therefore less number of Na+ reach into the cell.

>After a short time the voltage gated Na+ channels are inactivated and stop the taken in of the Na+.  Here the membrane potential rise to +45mV.

>As this occurs, the voltage gated K+ channels open and greatly increases the permeability to K+ ions. Therefore K+ leaves the cell under the influence of concentration gradient and electric gradient.

>As K+ leaves, the positive charge inside the cell is reduced. After awhile the equilibrium potential of K+ is obtained and the membrane is hyperpolarized. Now the membrane potential is -75mV. Hyperpolarization is due to the delay of closing the K+ channels compared to Na+ channels.

>The voltage gated K+ channels close and by then the Na+ channels recovered by inactivation.


12 March 2012

Basics of electroplating


Electroplating is the process of depositing a layer of metal electrolytically on to a surface.The articles to be plated make the cathode of an electrolytic cell and a rod of the plating metal makes the anode.

Normally pure metals are used. E.g. Cu, Ni, Cr, Au, Ag, Pt, Zn
But there are exceptions such as Alloys (Cu-Zn, Ni-Cr) and metal with polymers or ceramics (metal-PTEF, metal- Ceramic)

Requirements for electroplating  
-Proper bonding between the plating material and the surface.
-Evenness of the plating.
-Cleanliness
-Leak holes must not be left.
-Texture: should have high brightness.
-Resistant to chemicals in the environment that can cause damage.

Essential parts of electroplating

photo
Difference between Mn+ and complex ions
Complex ions release metal ions slowly. Therefore its concentration is low. It’s important to obtain a smooth ending.

Additional electrolyte can be used to increase the conductivity of the system but it will not effect the solution’s ions. Sodium sulphate is an additional electrolyte.

Additives
Additives increase the quality of the electroplating.
-Brighteners: Saccaric acid, Thiourea
-Levelers:  Formaldehydes
-stress relievers: organic substances
-wetting agents: Sodium lauryl suphate

Factors affecting the quality of the electroplating
-Nature of the electrolyte
-Concentration of the electrolyte
-Purity of the electrolyte
-Nature of the additives
-Concentration of the additives (should be low)
-pH of the solution
-Temperature
-Current density
-Geometry of the electrode(whether it’s round or flat)
-Shape of the bath
-Flow conditions (stirring is good)


Hull cell
To study the quality of electroplating dependence on the current density.

Haring-Blum cell
To determine the throwing power of the electroplating process. 


Biosynthesis and function of aromatic amino acids in plants


Most aromatic amino acids in plants are formed by three main types of aromatic acids;
  •    Phenylalanine
  •     Tyrosine
  •     Tryptophan

These three important aromatic amino acids are exclusively synthesized by Shikimic acid pathway that is unique to plants and microbes. This pathway got its name by an important intermediate forms,called Shikimic acid.

Shikimic acid pathway starts from the condensation of Erythrose-4-phosphate with Phosphoenolpyruvate (PEP). PEP is provided by the glycolysis while Erythrose-4-P comes from either oxidative pentose phosphate pathway or Calvin cycle. Therefore Shikimic acid pathway is combined with other important metabolic pathways of the cell. 
The condensation produces 3-deoxy-D-arabinoheptulosonic acid-7-phosphate (DAHP). DAHP undergoes another series of reactions including condensation with another molecule of PEP to give out Chorismic acid. Shikimic acid forms as an intermediate in this reaction and regarded as the key intermediate.
Chorismate is a central intermediate giving rise to two products; Prephenate and Anthranillic acid. Shikimic acid pathway is shown simply as below.

photo


The synthesis of aromatic amino acids is important as these amino acids are the precursors for the synthesis of defense and repair compounds.

Phenylalanine
·         Flavonoids: in plant pigments (eg: Anthocyanine), act against pathogens. Antioxidants.
·         Coumarins: Has appetite-suppressing properties.
·         Liginin: In lignicolous fungi

Tyrosine
·         Tocopherol: Antioxidant in cornifers.
·         Plastoquinone: Important in photosynthesis.
·         Cyanogenic glucosides: Phytoanticipants. Important in plant defense against herbivores due to bitter taste and release of toxic hydrogen cyanide upon tissue disruption.

Tryptophan
·         Alkaloides: provides protection as it prevents insects and herbivores eating the plant.
·         Plant growth regulators